Priorities for ocean microbiome research

Andre Abreu; Etienne Bourgois; Adam Gristwood; Romain Troublé; Silvia G. Acinas; Peer Bork; Emmanuel Boss; Chris Bowler; Marko Budinich; Samuel Chaffron; Vargas C de; Tom O. Delmont; Damien Eveillard; Lionel Guidi; Daniele Iudicone; Stephanie Kandels; Hélène Morlon; Fabien Lombard; Rainer Pepperkok; Juan José Pierella Karlusich; Gwenael Piganeau; Antoine Régimbeau; Guilhem Sommeria-Klein; Lars Stemmann; Matthew B. Sullivan; Shinichi Sunagawa; Patrick Wincker; Olivier Zablocki; Detlev Arendt; Josipa Bilic; Robert Finn; Edith Heard; Brendan Rouse; Jessica Vamathevan; Raffaella Casotti; Ibon Cancio; Michael Cunliffe; Anne Emmanuelle Kervella; Wiebe H.C.F. Kooistra; Matthias Obst; Nicolas Pade; Deborah M. Power; Ioulia Santi; Tatiana Margo Tsagaraki; Jan Vanaverbeke

doi:10.1038/s41564-022-01145-5

Priorities for ocean microbiome research

Andre Abreu
, Etienne Bourgois
, Adam Gristwood
, Romain Troublé
, Silvia G. Acinas
, Peer Bork
, Emmanuel Boss
, Chris Bowler^*
, Marko Budinich
, Samuel Chaffron
, Vargas C de
, Tom O. Delmont
, Damien Eveillard
, Lionel Guidi
, Daniele Iudicone
, Stephanie Kandels
, Hélène Morlon
, Fabien Lombard
, Rainer Pepperkok
, Juan José Pierella Karlusich

Gwenael Piganeau, Antoine Régimbeau, Guilhem Sommeria-Klein, Lars Stemmann, Matthew B. Sullivan, Shinichi Sunagawa, Patrick Wincker, Olivier Zablocki, Detlev Arendt, Josipa Bilic, Robert Finn, Edith Heard, Brendan Rouse, Jessica Vamathevan, Raffaella Casotti, Ibon Cancio, Michael Cunliffe, Anne Emmanuelle Kervella, Wiebe H.C.F. Kooistra, Matthias Obst, Nicolas Pade, Deborah M. Power, Ioulia Santi, Tatiana Margo Tsagaraki, Jan Vanaverbeke

^*Corresponding author for this work

School of Biological and Marine Sciences

Tara Ocean Foundation
CSIC - Instituto de Ciencias del Mar (ICM)
European Molecular Biology Laboratory
University of Maine
Centre National de la Recherche Scientifique
Research Federation (FR2022) Tara Oceans GO-SEE
Ecole Centrale de Nantes
Université Paris-Saclay
Sorbonne Université
Stazione Zoologica Anton Dohrn Napoli
Institut universitaire de France
CNRS, UMR 7232, BIOM, Observatoire Océanologique
University of Turku
Ohio State University
Swiss Federal Institute of Technology Zurich
University of the Basque Country
EMBRC ERIC
University of Gothenburg
Shanghai Ocean University
University of Algarve
Hellenic Centre for Marine Research
University of Bergen
Royal Belgian Institute of Natural Sciences

Research output: Contribution to journal › Article › peer-review

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Abstract

Microbial communities have essential roles in ocean ecology and planetary health. Microbes participate in nutrient cycles, remove huge quantities of carbon dioxide from the air and support ocean food webs. The taxonomic and functional diversity of the global ocean microbiome has been revealed by technological advances in sampling, DNA sequencing and bioinformatics. A better understanding of the ocean microbiome could underpin strategies to address environmental and societal challenges, including achievement of multiple Sustainable Development Goals way beyond SDG 14 'life below water'. We propose a set of priorities for understanding and protecting the ocean microbiome, which include delineating interactions between microbiota, sustainably applying resources from oceanic microorganisms and creating policy- and funder-friendly ocean education resources, and discuss how to achieve these ambitious goals.

Original language	English
Pages (from-to)	937-947
Number of pages	0
Journal	Nature Microbiology
Volume	7
Issue number	7
Early online date	30 Jun 2022
DOIs	https://doi.org/10.1038/s41564-022-01145-5
Publication status	Published - 30 Jun 2022

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

SDG 4 Quality Education
SDG 8 Decent Work and Economic Growth
SDG 14 Life Below Water
SDG 17 Partnerships for the Goals

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10.1038/s41564-022-01145-5

MicrobiomePrioritiesProof (1)Accepted author manuscript, 6.35 MB

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Abreu, A., Bourgois, E., Gristwood, A., Troublé, R., Acinas, S. G., Bork, P., Boss, E., Bowler, C., Budinich, M., Chaffron, S., de, V. C., Delmont, T. O., Eveillard, D., Guidi, L., Iudicone, D., Kandels, S., Morlon, H., Lombard, F., Pepperkok, R., ... Vanaverbeke, J. (2022). Priorities for ocean microbiome research. Nature Microbiology, 7(7), 937-947. https://doi.org/10.1038/s41564-022-01145-5

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abstract = "Microbial communities have essential roles in ocean ecology and planetary health. Microbes participate in nutrient cycles, remove huge quantities of carbon dioxide from the air and support ocean food webs. The taxonomic and functional diversity of the global ocean microbiome has been revealed by technological advances in sampling, DNA sequencing and bioinformatics. A better understanding of the ocean microbiome could underpin strategies to address environmental and societal challenges, including achievement of multiple Sustainable Development Goals way beyond SDG 14 'life below water'. We propose a set of priorities for understanding and protecting the ocean microbiome, which include delineating interactions between microbiota, sustainably applying resources from oceanic microorganisms and creating policy- and funder-friendly ocean education resources, and discuss how to achieve these ambitious goals.",

author = "Andre Abreu and Etienne Bourgois and Adam Gristwood and Romain Troubl{\'e} and Acinas, \{Silvia G.\} and Peer Bork and Emmanuel Boss and Chris Bowler and Marko Budinich and Samuel Chaffron and de, \{Vargas C\} and Delmont, \{Tom O.\} and Damien Eveillard and Lionel Guidi and Daniele Iudicone and Stephanie Kandels and H{\'e}l{\`e}ne Morlon and Fabien Lombard and Rainer Pepperkok and Karlusich, \{Juan Jos{\'e} Pierella\} and Gwenael Piganeau and Antoine R{\'e}gimbeau and Guilhem Sommeria-Klein and Lars Stemmann and Sullivan, \{Matthew B.\} and Shinichi Sunagawa and Patrick Wincker and Olivier Zablocki and Detlev Arendt and Josipa Bilic and Robert Finn and Edith Heard and Brendan Rouse and Jessica Vamathevan and Raffaella Casotti and Ibon Cancio and Michael Cunliffe and Kervella, \{Anne Emmanuelle\} and Kooistra, \{Wiebe H.C.F.\} and Matthias Obst and Nicolas Pade and Power, \{Deborah M.\} and Ioulia Santi and Tsagaraki, \{Tatiana Margo\} and Jan Vanaverbeke",

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doi = "10.1038/s41564-022-01145-5",

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Abreu, A, Bourgois, E, Gristwood, A, Troublé, R, Acinas, SG, Bork, P, Boss, E, Bowler, C, Budinich, M, Chaffron, S, de, VC, Delmont, TO, Eveillard, D, Guidi, L, Iudicone, D, Kandels, S, Morlon, H, Lombard, F, Pepperkok, R, Karlusich, JJP, Piganeau, G, Régimbeau, A, Sommeria-Klein, G, Stemmann, L, Sullivan, MB, Sunagawa, S, Wincker, P, Zablocki, O, Arendt, D, Bilic, J, Finn, R, Heard, E, Rouse, B, Vamathevan, J, Casotti, R, Cancio, I, Cunliffe, M, Kervella, AE, Kooistra, WHCF, Obst, M, Pade, N, Power, DM, Santi, I, Tsagaraki, TM & Vanaverbeke, J 2022, 'Priorities for ocean microbiome research', Nature Microbiology, vol. 7, no. 7, pp. 937-947. https://doi.org/10.1038/s41564-022-01145-5

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AU - Abreu, Andre

AU - Bourgois, Etienne

AU - Gristwood, Adam

AU - Troublé, Romain

AU - Acinas, Silvia G.

AU - Bork, Peer

AU - Boss, Emmanuel

AU - Bowler, Chris

AU - Budinich, Marko

AU - Chaffron, Samuel

AU - de, Vargas C

AU - Delmont, Tom O.

AU - Eveillard, Damien

AU - Guidi, Lionel

AU - Iudicone, Daniele

AU - Kandels, Stephanie

AU - Morlon, Hélène

AU - Lombard, Fabien

AU - Pepperkok, Rainer

AU - Karlusich, Juan José Pierella

AU - Piganeau, Gwenael

AU - Régimbeau, Antoine

AU - Sommeria-Klein, Guilhem

AU - Stemmann, Lars

AU - Sullivan, Matthew B.

AU - Sunagawa, Shinichi

AU - Wincker, Patrick

AU - Zablocki, Olivier

AU - Arendt, Detlev

AU - Bilic, Josipa

AU - Finn, Robert

AU - Heard, Edith

AU - Rouse, Brendan

AU - Vamathevan, Jessica

AU - Casotti, Raffaella

AU - Cancio, Ibon

AU - Cunliffe, Michael

AU - Kervella, Anne Emmanuelle

AU - Kooistra, Wiebe H.C.F.

AU - Obst, Matthias

AU - Pade, Nicolas

AU - Power, Deborah M.

AU - Santi, Ioulia

AU - Tsagaraki, Tatiana Margo

AU - Vanaverbeke, Jan

PY - 2022/6/30

Y1 - 2022/6/30

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AB - Microbial communities have essential roles in ocean ecology and planetary health. Microbes participate in nutrient cycles, remove huge quantities of carbon dioxide from the air and support ocean food webs. The taxonomic and functional diversity of the global ocean microbiome has been revealed by technological advances in sampling, DNA sequencing and bioinformatics. A better understanding of the ocean microbiome could underpin strategies to address environmental and societal challenges, including achievement of multiple Sustainable Development Goals way beyond SDG 14 'life below water'. We propose a set of priorities for understanding and protecting the ocean microbiome, which include delineating interactions between microbiota, sustainably applying resources from oceanic microorganisms and creating policy- and funder-friendly ocean education resources, and discuss how to achieve these ambitious goals.

UR - https://pearl.plymouth.ac.uk/bms-research/1057/

U2 - 10.1038/s41564-022-01145-5

DO - 10.1038/s41564-022-01145-5

M3 - Article

SN - 2058-5276

VL - 7

SP - 937

EP - 947

JO - Nature Microbiology

JF - Nature Microbiology

IS - 7

ER -

Priorities for ocean microbiome research

Abstract

UN SDGs

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