Metagenomics Reveals Planktonic Bacterial Community Shifts across a Natural CO2 Gradient in the Mediterranean Sea.

Ashvini Chauhan; Ashish Pathak; Riccardo Rodolfo-Metalpa; Marco Milazzo; Stefan J. Green; Jason M. Hall-Spencer

doi:10.1128/genomeA.01543-14

Metagenomics Reveals Planktonic Bacterial Community Shifts across a Natural CO2 Gradient in the Mediterranean Sea.

Ashvini Chauhan^*
, Ashish Pathak
, Riccardo Rodolfo-Metalpa
, Marco Milazzo
, Stefan J. Green
, Jason M. Hall-Spencer

^*Corresponding author for this work

School of Biological and Marine Sciences

Florida A&M University
UMR 250 ENTROPIE
University of Palermo
University of Illinois at Chicago

Research output: Contribution to journal › Article › peer-review

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Abstract

Bacterial communities at a CO2 vent (pH 6.7) were compared with those at control (pH 8.0) and transition sites (pH 7.6) using 16S rRNA metagenomics. Firmicutes and unclassified bacteria dominated across all sites, Proteobacteria, especially Gammaproteobacteria, declined, and Epsilonproteobacteria increased in the vent with an increase in Bacteroidetes at both the vent and transition sites.

Original language	English
Number of pages	0
Journal	Genome Announc
Volume	3
Issue number	1
DOIs	https://doi.org/10.1128/genomeA.01543-14
Publication status	Published - 12 Feb 2015

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10.1128/genomeA.01543-14

Metagenomics Reveals Planktonic Bacterial Community Shifts across a Natural CO2 Gradient in the Mediterranean Sea

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title = "Metagenomics Reveals Planktonic Bacterial Community Shifts across a Natural CO2 Gradient in the Mediterranean Sea.",

abstract = "Bacterial communities at a CO2 vent (pH 6.7) were compared with those at control (pH 8.0) and transition sites (pH 7.6) using 16S rRNA metagenomics. Firmicutes and unclassified bacteria dominated across all sites, Proteobacteria, especially Gammaproteobacteria, declined, and Epsilonproteobacteria increased in the vent with an increase in Bacteroidetes at both the vent and transition sites.",

author = "Ashvini Chauhan and Ashish Pathak and Riccardo Rodolfo-Metalpa and Marco Milazzo and Green, \{Stefan J.\} and Hall-Spencer, \{Jason M.\}",

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AU - Chauhan, Ashvini

AU - Pathak, Ashish

AU - Rodolfo-Metalpa, Riccardo

AU - Milazzo, Marco

AU - Green, Stefan J.

AU - Hall-Spencer, Jason M.

PY - 2015/2/12

Y1 - 2015/2/12

N2 - Bacterial communities at a CO2 vent (pH 6.7) were compared with those at control (pH 8.0) and transition sites (pH 7.6) using 16S rRNA metagenomics. Firmicutes and unclassified bacteria dominated across all sites, Proteobacteria, especially Gammaproteobacteria, declined, and Epsilonproteobacteria increased in the vent with an increase in Bacteroidetes at both the vent and transition sites.

AB - Bacterial communities at a CO2 vent (pH 6.7) were compared with those at control (pH 8.0) and transition sites (pH 7.6) using 16S rRNA metagenomics. Firmicutes and unclassified bacteria dominated across all sites, Proteobacteria, especially Gammaproteobacteria, declined, and Epsilonproteobacteria increased in the vent with an increase in Bacteroidetes at both the vent and transition sites.

UR - https://pearl.plymouth.ac.uk/bms-research/477/

U2 - 10.1128/genomeA.01543-14

DO - 10.1128/genomeA.01543-14

M3 - Article

SN - 2169-8287

VL - 3

JO - Genome Announc

JF - Genome Announc

IS - 1

ER -

Metagenomics Reveals Planktonic Bacterial Community Shifts across a Natural CO2 Gradient in the Mediterranean Sea.

Abstract

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