Genome comparison of two Coccolithoviruses

Michael J. Allen; Declan C. Schroeder; Andrew Donkin; Katharine J. Crawfurd; William H. Wilson

doi:10.1186/1743-422x-3-15

Genome comparison of two Coccolithoviruses

Michael J. Allen, Declan C. Schroeder, Andrew Donkin, Katharine J. Crawfurd, William H. Wilson^*

^*Corresponding author for this work

School of Biological and Marine Sciences

Research output: Contribution to journal › Article › peer-review

Abstract

Abstract Background The Coccolithoviridae is a recently discovered family of viruses that infect the marine coccolithophorid Emiliania huxleyi. Following on from the sequencing of the type strain EhV-86, we have sequenced a second strain, EhV-163. Results We have sequenced approximately 80% of the EhV-163 genome, equating to more than 200 full length CDSs. Conserved and variable CDSs and a gene replacement have been identified in the EhV-86 and EhV-163 genomes. Conclusion The sequencing of EhV-163 has provided a wealth of information which will aid the re-annotating of the EhV-86 genome and identified a gene insertion in EhV-163.

Original language	English
Number of pages	0
Journal	Virology Journal
Volume	3
Issue number	1
Early online date	22 Mar 2006
DOIs	https://doi.org/10.1186/1743-422x-3-15
Publication status	Published - Dec 2006

Access to Document

10.1186/1743-422x-3-15

Cite this

@article{6aa7adc632da4815b7f21436ca1b6cd1,

title = "Genome comparison of two Coccolithoviruses",

abstract = "Abstract Background The Coccolithoviridae is a recently discovered family of viruses that infect the marine coccolithophorid Emiliania huxleyi. Following on from the sequencing of the type strain EhV-86, we have sequenced a second strain, EhV-163. Results We have sequenced approximately 80% of the EhV-163 genome, equating to more than 200 full length CDSs. Conserved and variable CDSs and a gene replacement have been identified in the EhV-86 and EhV-163 genomes. Conclusion The sequencing of EhV-163 has provided a wealth of information which will aid the re-annotating of the EhV-86 genome and identified a gene insertion in EhV-163. ",

author = "Allen, {Michael J.} and Schroeder, {Declan C.} and Andrew Donkin and Crawfurd, {Katharine J.} and Wilson, {William H.}",

year = "2006",

month = dec,

doi = "10.1186/1743-422x-3-15",

language = "English",

volume = "3",

journal = "Virology Journal",

issn = "1743-422X",

publisher = "BioMed Central Ltd.",

number = "1",

}

TY - JOUR

T1 - Genome comparison of two Coccolithoviruses

AU - Allen, Michael J.

AU - Schroeder, Declan C.

AU - Donkin, Andrew

AU - Crawfurd, Katharine J.

AU - Wilson, William H.

PY - 2006/12

Y1 - 2006/12

N2 - Abstract Background The Coccolithoviridae is a recently discovered family of viruses that infect the marine coccolithophorid Emiliania huxleyi. Following on from the sequencing of the type strain EhV-86, we have sequenced a second strain, EhV-163. Results We have sequenced approximately 80% of the EhV-163 genome, equating to more than 200 full length CDSs. Conserved and variable CDSs and a gene replacement have been identified in the EhV-86 and EhV-163 genomes. Conclusion The sequencing of EhV-163 has provided a wealth of information which will aid the re-annotating of the EhV-86 genome and identified a gene insertion in EhV-163.

AB - Abstract Background The Coccolithoviridae is a recently discovered family of viruses that infect the marine coccolithophorid Emiliania huxleyi. Following on from the sequencing of the type strain EhV-86, we have sequenced a second strain, EhV-163. Results We have sequenced approximately 80% of the EhV-163 genome, equating to more than 200 full length CDSs. Conserved and variable CDSs and a gene replacement have been identified in the EhV-86 and EhV-163 genomes. Conclusion The sequencing of EhV-163 has provided a wealth of information which will aid the re-annotating of the EhV-86 genome and identified a gene insertion in EhV-163.

U2 - 10.1186/1743-422x-3-15

DO - 10.1186/1743-422x-3-15

M3 - Article

SN - 1743-422X

VL - 3

JO - Virology Journal

JF - Virology Journal

IS - 1

ER -

Genome comparison of two Coccolithoviruses

Abstract

Access to Document

Fingerprint

Cite this